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JGI at the AGU Fall Meeting
December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … proposals: Collaborate With a U.S. DOE User Facility: Learn About Available Expertise and Resources, Open-Call … Kelly Wrighton, Colorado State University: “Putting microorganisms on the map: continental-scale context for …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate bioenergy … to address long-standing evolutionary ecological hypotheses about how C4 perennial grasses like switchgrass respond to …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students … 2016 CAMP Statewide Undergraduate Research Symposium , held February 6 at the University of California, Irvine, … at UC Merced. Cristhian and Bryan both spoke briefly about their internship experiences at the DOE JGI – revisit …
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David Goodstein
KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of … Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in … Scientific Advisory Board member, InterMine (www.intermine.org) … Education … Selected Publications … Awards and Service …
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Igor Grigoriev
… training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal … engaged thousands of researchers in genome projects and organized numerous genomics workshops. … Igor Grigoriev is … Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Massie S. Ballon
… the Biosciences Area representatives to Berkeley Lab’s Inclusion, Diversity, Equity & Accountability (IDEA) Chairs … staff and user community. … LBNL Biosciences Area Organizational Stewardship committee 2020: Lawrence Berkeley … Member, Capitol Science Communicators … Education … About the JGI Manager of Communications & Outreach … Awards …
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Tracking the Origins of Methane-Producing Microbes
… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: … and, acetoclastic. All three pathways require the gene cluster for methane production known as Mcr. Until recently, …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes shiitake mushrooms special. This week, he and 39 collaborators published a paper tracing how these mushrooms have evolved.  …
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions between the trees, … under contract DE-AC05-00OR22725. The work ( https://doi.org/10.46936/10.25585/60000017 ) conducted by the U.S. …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those …
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Pinning Down a Piece of Photosynthesis
… an array of experiments at universities and national user facilities, researchers found that this protein detects … we were able to work with on this project to ask questions about structure and function,” Blaby-Haas said.  Looking at … coding for proteins that are unique to photosynthesizing organisms.  “And perhaps surprising to a lot of people — a …
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