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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy … challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy (DOE) partnered with the …
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Partnerships: Adopt-A-Genome
… to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the … educators from a broad range of disciplines up-to-speed with some of the latest developments in microbial genomics, …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy … of Stan­ley Hall at the University of California, Berkeley, when the phone rang. On the line was Jillian Banfield, a …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … biomass sources in ways we are only just beginning to understand. A better understanding of rumen and the microbes … “It has become a tool widely used,” Leahy told JGI recently when we caught up with her. “… We are very happy that the …
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Training the Next Generation of Talent
… research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University … student in the Quantitative Systems Biology (QSB) Group under the School of Natural Sciences (SNS). During his eight …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes … Research program because it also allows scientists to understand the assembly, function, and the behavior of … conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a host, and not just any host will do. It must be a specific host the virus has adapted to … conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science …
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DOE JGI Interns Share Their Summer Experiences
… crunching genomic data at a computer; a few had the opportunity to spend time out in the field, work at the lab bench, … desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two undergraduate students and two graduate students from UC …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the … in Building 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one … up as moving boxes are filled and stacked for transport. When considering how to do similarly large moves at the main …
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From Competition to Cooperation
… independently evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed on decaying plant matter (saprotrophs) have transitioned to the symbiotic lifestyle. The Impact The analysis enables researchers to understand how plants and fungi developed symbiotic …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… our  2022 Annual Meeting . The meeting was a hybrid event, with guests joining onsite at the Integrative Genomics … Lab, who discussed the exciting progress in gene editing made possible by CRISPR-Cas9; the Weizmann Institute of … who discussed her work on transposable elements and how understanding these genes has helped pave the way for the …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy … isolated from the microbes found in the oil plume from Deepwater Horizon oil spill led to a draft genome of the first …
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