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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career Research … this spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with … to contribute to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ …
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Finding the Fermenters
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … by the DOE Biological and Environmental Research (BER) program to enable scientific discovery in support of the DOE … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on …
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Tracing the Evolution of Shiitake Mushrooms
… sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … Libusha Kelly , Albert Einstein College of Medicine JGI Organizers Simon Roux, Jonelle Basso, Maureen Berg, …
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Picking Up Threads of Cotton Genomics
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the HudsonAlpha … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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A Complex Confection Decoded: Sugarcane Reference Genome
… sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve sugarcane … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … All sequencing was done through the JGI Community Science Program . Using an ecology metric called beta diversity, the … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His … also carries out custom preparative work for difficult user projects, including those that require fluorescence …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a HudsonAlpha … of whole genes,” Kellogg agreed. “Getting that information is hard. There’s a good reason nobody’s done it; …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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How Microbes Can Protect Plants in Drier Straits
New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more …
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