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… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … … This work was supported through a USDA NIFA award (2021-67019-34608) to M.J.W. FTICR-MS analyses were performed …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … began to offer a window into viral existence. Along with highlighting the viruses in a given sample, …

A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … microbial factory, capable of turning abundant biomass carbohydrates — glucose and xylose — into fatty acids … of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s …

… plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth …

Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … that figure is likely closer to a mere 250,000 years — with many key colonization events in the Atlantic ocean …

… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … National Laboratory (Berkeley Lab). He completed this work with collaborators at the University of Wisconsin-Madison as … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified …

… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … Serve the Changing Planet (download a copy at jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a …

… group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … at Warp Drive Bio, and as a bioinformatics HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" … (1996) … List available on Google Scholar … Education … Publications …

… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, taxonomic, and … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …

… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … et al. Comparative genomic analysis of the thermophilic biomass-degrading fungi  Myceliophthora thermophila and  … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …