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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired … CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as the … Lab) can then employ CRISPR in a variety of microbial hosts. Summary Photorhabdus luminescens proves fatal to …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine Database … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Single Nucleotide Polymorphism Charting of P. patens Reveals Accumulation of Somatic Mutations During in vitro Culture on the Scale of Natural Variation by Selfing
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, … that goal will mean slashing direct emissions from energy, natural gas and electricity, as well as embodied emissions. …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea … distance from other parts of the world have kept microbial populations on Antarctica distinct and unique. In … in response to viral infections and are important for virus-host interactions. Analysis of strain variation showed that …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … genomics and synthetic biology, a team studying microbial populations in oxygen minimum zones identified SAR11 …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative … The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no … by the United States Department of Agriculture National Institute of Food and Agriculture grant 2018-67015-27495, …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … successfully simulated how successive waves of microbial populations degraded the dispersed oil.   Terry Hazen on …
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CSP Functional Genomics
… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … the applicant.  Learn about the general review process or find details on the internal synthetic biology review process …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … how the interactions between viruses and their host microbes impact the regulation of global nutrient … that can be compared across studies, (ii) predicting which hosts these viruses are likely to infect, and (iii) …
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