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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of first, including the flagship internship program between … Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more …
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User Support Analysis Group
… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …
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Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae
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The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … in the oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …
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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96
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