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Scaling Up Existing Skill Sets
… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer … One of my favorite thing about my JGI internship was the learning experience I got in computational research. …
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The Integrated Microbial Genome Resource of Analysis
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High-resolution phylogenetic microbial community profiling
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A Comparison of Microbial Genome Web Portals
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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CSP New Investigator Call
… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   … assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data usage by the …
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From Textbook to Real World Applications
… When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal interactions, and predictive biology, modeling and biodesign — … LOIs/proposals are approved will receive further instructions via email.   Human or animal disease-related work will …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. … may tune gene expression; and investigate corresponding proteins. PhycoCosm’s built-in connection to the DOE Systems … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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