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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern … aspects of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a … associated genes are great resources for bioremediation, new agricultural applications or life-saving drugs. A better …
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JGI Advisory Committees Code of Conduct
… to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values , which guide the relationships we nurture in our … establish with our stakeholders. In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage openness, …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … were previously no genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 …
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How Filamentous Fungi Sense Food
… crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach … metabolized in filamentous fungi. The work also suggests a new approach to gene annotation, which then can be explored … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … flowering plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in … hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … , a team led by Rick Cavicchioli at the University of New South Wales along with researchers at the U.S. …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral … and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched …
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Dan Rokhsar
… Project, Professor Dr. Rokhsar ’s team has continued to develop computational methods applicable to the diverse eukaryotic species, which they have applied and … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …
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Nikos Kyrpides
… in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to … fungal genomes. They manually curate data to connect to the newly generated Myco-Ed reference genomes made available in …
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