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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the … lineages. The Science From the distinct smell of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse … genomes allowed researchers to study the conservation and evolution of the genes responsible for terpene synthase …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… with precise gene targeting transforms oil-producing alga into a powerful platform for developing ​​bio-based industrial …   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … be deleted opens new engineering possibilities. The rapid evolution observed suggests directed evolution could quickly …
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two … oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Genome analysis of ‘Candidatus Ancillula trichonymphae’, first representative of a deep‐branching clade of Bifidobacteriales, strengthens evidence for convergent evolution in flagellate endosymbionts
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Directed Evolution of Flavin-Dependent Halogenases for Site- and Atroposelective Halogenation of 3‑Aryl-4(3H)‑Quinazolinones via Kinetic or Dynamic Kinetic Resolution
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Computationally Classifying Fungal Lifestyles
… learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could provide more insights …
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Ian Blaby
… design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … function predictions and also due to the inability to link experimental evidence across species. Centralized databases … allowed us to pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … that showcase our collaborations and capabilities to enable great science that will help solve energy and … study his student conducted involving fungal rust pathogen resistance. Just as the common gardens have flourished, so …
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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … process called fermentation. To better understand the range of bacteria and archaea that rely on this form of …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their …
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