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Tanja Woyke
… et al. 2020. Giant virus diversity and host interactions through global metagenomics. Nature 578, 432-436. Bowers et … 315, 998-1000. Woyke et al. 2006. Symbiosis insights through metagenomic analysis of a microbial consortium. … Selected Publications …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. … much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are …
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JGI@25: Roots of a Mutualist Relationship
… available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of ectomycorrhizal fungi, excerpted from his talk at the 2015 JGI Annual …
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques … are of interest for their potential use in number of biotechnological applications. Molecular biology has … genomic activity (gene expression), and direct microscopy. Through the JGI’s Community Science Program , the team used …
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A Sorghum Pangenome Opens More Doors to Discovery
… Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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An Addiction Crucial to a Fungus’ Reproduction
… transcriptomic dataset of sexual reproduction in early fungi and discovered genes that are critical for this … on a poorly understood group of oleaginous or oil-producing fungi, and the impact this mutualistic interaction has on these potential large-scale biodiesel producing fungi. Summary In heritable mutualisms, hosts pass on …
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JGI Advisory Committees Code of Conduct
… concerns publicly (e.g., in response to media requests, through social media channels); Coordinate messaging with …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome … they regulate their genomes, but is not well understood in fungi. A team of researchers reported on the largest … tree of life to date, involving more than 500 species of fungi. The Impact Interactions between plants and fungi run …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … and deliver those nutrients to tree roots and soil. These fungi help shape a forest’s ecology. They store carbon and … key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree health and carbon …
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The fungus that made itself at home
… so destructive in houses. A study involving six brown rot fungi reveals the genomic changes Serpula lacrymans has … User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. lacrymans from Europe and … or confrontation experiments, involving these three Serpula fungi against three other brown rot fungi to see how the …
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