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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … key to better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Viruses Reprogram Cells into Different Virocells
… infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … As part of efforts to characterize global microbial diversity with an aim to improve predictive ecosystems … In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. Sneddon is an accomplished leader in data, … in bacteria. Proceedings of the National Academy of Sciences of the United States of America 109(3), 805–810 …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … joining the JGI, Dr. Yoshikuni was co-founder and chief science officer at a clean technology startup, Bio … Yasuo Yoshikuni is the DNA Synthesis Science Program Head at the JGI. Click to learn more about …
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First Monoploid Reference Sequence of Sugarcane
… a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two sets of … breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two identical … sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in developing …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional … researchers to submit white papers to the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional …
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Kjiersten Fagnan
… the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also … how the JGI supports the entire data life cycle through resources including the JGI portals, and our broader data ecosystem. … National Microbiome Data Collaborative: enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). …
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Microbial Diversity for Biotechnology
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — … secondary metabolites and associated genes are great resources for bioremediation, new agricultural applications or … studied in plant research laboratories and plant biology courses across the globe for insights into reproductive, …
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JGI Launches Latest Strategic Plan
… — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … and incubation process. “JGI’s ‘vision’ is truly a tour de force,” said Mary Maxon, Biosciences Associate … of a Secondary Metabolites research group (pages 47-49). “Our hope is to circulate this document widely within the …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … and inspire next-generation researchers while preserving biodiversity and yielding demonstrable economic benefits. …
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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering the true diversity of the fungal kingdom. The abundance of fungal …
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