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A Grass Model to Help Improve Giant Miscanthus
… insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for … allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … to novel traits. M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … the microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. …
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JGI Early Career Researchers Featured in mSystems Special Issue
… beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … National Laboratory (Berkeley Lab). JGI is a DOE Office of Science user facility at Berkeley Lab.   … The U.S. … working to address some of the most pressing challenges of our time. For more information, please visit  …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed …
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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
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Novel Viral DNA Polymerases From Metagenomes Suggest Genomic Sources of Strand-Displacing Biochemical Phenotypes
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane
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