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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … for User Science (FICUS) initiative . In this program, researchers leverage the capabilities of more than … for User Science (FICUS) initiative and used resources at the Environmental Molecular Sciences Laboratory …
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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake
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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes … no. DE-AC02-05CH11231. The Georgia Advanced Computing Resource Center (GACRC) and Georgia Genomics and Bioinformatics …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … genomics have afforded JGI users and the larger research community a means to access microbial lineages from a …
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High-resolution phylogenetic microbial community profiling
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Olpidium, The Key to the Origin of Terrestrial Fungi
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … the zoospores were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium … Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American … as Adjunct Scientist at the Bigelow Laboratory for Ocean Sciences and as Associate Adjunct Professor at the …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic …
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JGI Workshops at PAG
… field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we will present current and … Program and how you can use the KBase system to accelerate your plant genomics research. …
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Making a Lichen Together
… and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that … colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy (DOE) Joint … the Duke Institute of Genomic Sciences and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, …
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