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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… genomics and metagenomics. They cited her “landmark” 2013 Nature paper , which uncovered nearly 30 major previously … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the …
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MGM Workshop at Fisabio Summer School
… will train participants in state-of-the-art analytical methods in this area, by means of theoretical lectures and …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … et al (2023) Lignin deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Evolution of a Fungal Gene Expression Regulator
Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … exploration of genomic DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at …
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MGM Workshop at Fisabio Summer School 2025
… will train participants in state-of-the-art analytical methods in this area, by means of theoretical lectures and …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users … with  Science Programs and  Operations enable the JGI to focus on expanding molecular capabilities and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … possibilities, and maximizes returns from the demanding nature of SIP experiments.  Especially as machine learning …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … speciation events within existing species. Within the JGI’s production pipeline, ANI is used to ascertain the … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …
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University of California, Merced Internship Program
Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to … students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them …
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