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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of … updates and new features. Nucleic acids research Jan 2023 Camargo AP, Nayfach S, Chen I-MA, Palaniappan K, Ratner …
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Frederik Schulz
Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … a temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs …
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The International Virus Bioinformatics Meeting 2020
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Partners
The JGI leverages its existing partnerships and develops others … advance the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha … our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review procedures and the annual user …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … with  Science Programs and  Operations enable the JGI to focus on expanding molecular capabilities and …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … source. We looked at the plant’s response in the aboveground and root tissues. The striking thing we found was …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant … undergone. The Impact The number of microbes in, on, and around the planet is an astronomical figure, and yet viruses … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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