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Leo Baumgart
… and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … Player-Jackson et al. "Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)." In 2025 IEEE International Conference on eScience (eScience), pp. 141-149. IEEE, 2025. Baumgart, Leo …
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Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome
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The Expanding Universe of Methane Metabolisms in Archaea
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome … that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” … found on early Earth.”  Through the JGI Community Science Program, Inskeep and McKay recovered …
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John Vogel
… switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts …
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JGI & KBase at PAG XXVII
… (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you can use the KBase system to …
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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… our collaborations and capabilities to enable great science that will help solve energy and environmental … lead the Forest Pathology and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor … with support of the US Department of Energy Office of Science, as well as from the US Department of Agriculture …
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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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Restoring wetlands on intensive agricultural lands modifies nitrogen cycling microbial communities and reduces N2O production potential
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JGI@25: Strengthening Soybean
… our collaborations and capabilities to enable great science that will help solve energy and environmental … to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … doesn’t yield enough gallons of fuel per acre to compete with gasoline. Yet.  In 2010, soybean became the first …
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Webinar: PhycoCosm Tutorial
… not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If … is based on a model that is not based on a genome model with PhycoCosm, how do we go about getting it in your … project? A: Combination of: DOE mission relevance Science User community – trying to produce resources for …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable biotechnology discoveries. (Pictured from … Mission  As a U.S. Department of Energy Office of Science user facility supported by the Biological and …
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