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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale … efforts including systems-based approaches to unravel functional capabilities of plants, microbes and microbial …
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CSP Large Scale Call
… projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal interactions, and predictive biology, … For the CSP Large Scale call, a Letter of Intent (LOI) is required by the due date printed below. Proposals will be invited from those applicants …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … Neurospora crassa, and to identify and decide on the order in which this fungus breaks down plant cell wall materials … use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  synthesis and … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … fluctuating environmental conditions. The team aims to functionally link gene families to photosynthesis and … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for … lead Cas9 to make a lethal double-strand DNA break, a dysfunctional sgRNA would be harmless. The team was thus able …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic … With the virus-host boundary clearly defined using functional annotation methods, it was possible to …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find … University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on … our seven science program — their areas of focus, major initiatives and more.  … formulation and implementation of scientific policy, engaging in interactions with the scientific community at large. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE …
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