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Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)
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Metagenomic reconstructions of bacterial CRISPR loci constrain population histories
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Hybridization breaks species barriers in long-term coevolution of a cyanobacterial population
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The Science … work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls microbial … resonance energy transfer (BRET)-based biosensors. In general, CSL biosensors produce large signal changes, but …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… genomics and synthetic biology, a team studying microbial populations in oxygen minimum zones identified SAR11 … to experimental characterization and validation of the functional potential of these new lineages. …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, … an enzyme system that was previously only understood at a genetic level. Functional and structural experiments showed … convertible to ethylene, he began looking into the genetic foundations of what would become the MAR enzyme .  …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a … proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify genes … The Impact One of the challenges in understanding wild populations is that tests to find associations between …
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Plant Program User Advisory Committee
… and quality. The Committee does not perform management functions nor does it direct the Program's management team …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and … bias the analyses. MAGs could also represent composites of populations where individual strains are collapsed, while …
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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics
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