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Team Science Reveals Important Protein in Poplar
… (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin … With increased lignin and iron, engineered poplar can be used to develop bioproducts for industrial applications. For example, lignin could be used for … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, and is supported by the Office of Science of …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing … genomic potential into practical applications, including sustainable biofuels, biomaterials, natural products, and … biodegradation and biogeochemistry. The program’s focus is on large-scale sequencing efforts that survey the vast …
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Computationally Classifying Fungal Lifestyles
… an algorithm that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … had access to over 100  Dothideomycetes genomes, just enough of a sample size to test if a computer algorithm …
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THE Bioenergy Tree
… The US Department of Energy’s favorite tree is poplar. They’re … who have uncovered remarkable genetic secrets that bring us closer to making poplar an economical and sustainable source of energy and materials. …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate bioenergy … (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production … microbe-microbe and plant-microbe interactions in various environments to improve crop yield, and developing a …
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Pinning Down a Piece of Photosynthesis
… an array of experiments at universities and national user facilities, researchers found that this protein detects … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of blueprints to find parts …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … of essential genes in metabolic networks that were missed using traditional approaches. This novel form of intermediate expression, when used in addition to traditional methods, can offer …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … like a duck and quacks like a duck, so the adage goes, it must be a duck. But if the duck gets infected by a virus so … cells as virocells, a change in name first described in 2011 which reflects the metabolic changes they’ve undergone. …
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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy
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Genome-Resolved Metagenomic Insights into Massive Seasonal Ammonia-Oxidizing Archaea Blooms in San Francisco Bay
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Metagenomes, Metatranscriptomes, and Metagenome-Assembled Genomes from Chesapeake and Delaware Bay (USA) Water Samples
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