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At the Forefront of Terrestrial Virus Research
Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research opportunities …
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How Microbes Can Protect Plants in Drier Straits
New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal … supported through the Emerging Technologies Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … supported in part by the Allen Distinguished Investigator Program, through The Paul G. Allen Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National …
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Marine Microbe Contains Multitudes
… pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 exist in so many … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also processed using the …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting …
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Picking Up Threads of Cotton Genomics
All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in size, and are hybrids … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the HudsonAlpha …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision … to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, … and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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Toward More Efficient Artificial Photosynthesis
… them to test composition variants. Summary In the  May 8, 2020 issue of  Science , a team led by Tobias Erb, director … The work was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two supercomputers — … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope … to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host researchers in …
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