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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a … effort, researchers have identified a protein in soil viruses that may promote soil health. The work was enabled in … Research (BER) and is a contribution of the Scientific Focus Area “Phenotypic response of the soil microbiome to …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … give researchers a way to access much more information about fungi in these environments. “Now with these new tools … a bumpy, winding road, this new influx of genomes opened a superhighway for the same route. “It was really amazing how …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… of experts of the International Committee on Systematics of Prokaryotes. Due to the ongoing pandemic, Woyke will receive … 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. A senior … Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American …
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Webinar: SIP technologies at EMSL and JGI
… and the JGI’s Rex Malmstrom provided background on the various isotope-related technologies available at JGI and EMSL … the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for enrichment? A:  The JGI uses … C13 and sort of the isotope of proteomics, what about doing this with metabolites at EMSL? A:  The answer to …
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and … for their PhD research. And for the first time in this program’s history, two interns returned to re-engage with … foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She … Nuevo is, historically, a fishing town and we know little about its coastal microbial ecology. We also know little …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … JGI staff, collaborators and users to see how software and supercomputing capabilities have evolved to enable … from this sample set through the Community Science Program, it was the largest project the JGI had ever put …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in … that’s an example of a yucca species. And the cool thing about yuccas is that there are closely related species that …
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Massie S. Ballon
… as help cultivate the next generation of genomic research users, partners, and collaborators.  Ms. Ballon is a … to see the coverage of JGI-enabled science highlighting user research, newly accepted proposals, and outreach … The Manager of Communications & Outreach is responsible for sustaining the integrity of the JGI brand through an …
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Ian Blaby
… the Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … a group lead at Brookhaven National Laboratory where he focused on functional genomics of phototrophs. Through this and … systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a custom high-throughput platform at the Joint Genome Institute …
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JGI announces final round of 2022 Functional Genomics awardees
… functional genomics research from potential users who need help translating genomic information into … the next deadline is July 31. You can learn more about our Community Science Program here .  …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … be applied to biotechnology and medicine. A more robust understanding of these microbial communities could lead … separate, seawater seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an …
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