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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  … of gene expression and the observable characteristics in an organism. The experiment was led by Hal Alper, professor and …
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Yasuo Yoshikuni
… Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production … developing genome engineering tools for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to improve crop yield, and developing a …
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Game On: High School Students Drive Everglades Metagenomics Study
… Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … location because much is unknown about the diversity of organisms (taxonomy) and particularly those in processing …
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JGI@25: Building a Better Bean
… may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Access to Rock Star Scientists
… so nice and helpful.”     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to talking about their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, well, the little stuff! People hold …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two … The Impact Biomaterials are materials produced by living organisms. The collaboration between the JGI and the Foundry … can synthesize other bio-based materials. For information about licensing the patented osteoyeast for hydroxyapatite …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … by the Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures GmbH, based in Braunschweig, … information as well as of important descriptive metadata about each strain. “This has been a very fruitful …
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Finding the Fermenters
… database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… State have been succumbing to a pathogen. This ‘“alien’” organism — one previously unseen — is, in fact, a microscopic water mold, … scores of nurseries across the nation, elevating concerns about the pathogen to an all-time high. California … Release: JGI, VBI Describe Evolutionary Origin, Disease-Causing Mechanisms of Sudden Oak Death, Related Soybean …
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Gotta Catch 'Em Gall
… called galls.  In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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Jasmyn Pangilinan
… provides bioinformatics tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and collaboration, she works to develop and …
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