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Fungal Friends or Foes in Plant Roots
… of the key community participants and enabling future metagenomics studies.   …
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Three Join the JGI User Executive Committee
… CSP and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA … a breadth of institutions, research topics and career stages. The election period concluded on January 8, 2024. …
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JGI@25: Using Team Science to Build Communities Around Data
… for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) sequencing. Shotgun metagenomic sequencing takes much less time than its …
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Soil virus offers insight into maintaining microorganisms
… impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… . The team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the … been co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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Triggering Morel Fruiting
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Applying Viral Genomics Expertise to Understanding the Human Virome
… CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol … (“contigs”) from thousands of ecologically diverse metagenomics samples. The work is supported by NIH Common …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very … with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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