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… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … is displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … food web and change the oceans as we know them. At the base of marine food webs are microscopic photosynthesizing …

… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at …

… The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … and improve results. Applying this method to the study of a particular fungi, researchers identified novel …

… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … tool will make the right cut, researchers created a set of guide RNAs that were effective against 94 percent of the … genes were essential to  Y. lipolytica . They identified 1,377, or 17.5 percent, of  Y. lipolytica ’s genes to be …

… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The … and female sexes. For the first time, the sex chromosomes of shrub willow have been sequenced with sufficient … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to …

… been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … of the Emerging Technologies Opportunity Program in 2013, a team of researchers has been working on improving … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in …

… and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, … automated sequence quality control and automation of microbial/metagenomic assemblies, portals that make data … he worked with the Informatics Department to develop software that pushed instrument run information directly into …

… studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the … Fungal Datasets …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … investigated Chromosome 16, which contains about 3% of the human genome. They wanted to learn about the genes …

… and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a … was used to take the complex, high-dimensional data (the 136 tetranucleotide frequencies for each of the 12,063 …

…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) … and Katherine Louie for the JGI Metabolomics Platform Blake Simmons for The BioManufactory Completed VFP …