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The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.
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Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
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Genome Analysis Reveals Diversity and Functional Potential of Novel Janthinobacterium Species From Subarctic Soils
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Ian Blaby
… 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP … Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial molecular biology Post-doctoral positions  – … et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … “autopolyploids”, genome duplication occurs within a single species. By contrast, “allopolyploids” arise when different … clearly identifies the four subgenomes based on non-genic sequences.”  In his words, the history of the strawberry is …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in … switches identified are shared across hundreds of related species, meaning these insights are potentially broadly … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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Igor Grigoriev
… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the …
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… But for them to be able to pull that water through the whole plant system, they need to open these pores in their … If you know Joshua Tree, that’s an example of a yucca species. And the cool thing about yuccas is that there are … all sorts of other intermediate phenotypes where plants are using a little bit of both of the pathways.  ALISON: …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be … use for stream health, they look at how many invertebrate species are there.  ALISON:  Those invertebrate species …
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JGI Accepts 17 Proposals for Community Science Program
… State University and colleagues are interested in the microbial communities that live on Alaska’s glacially … such as the Copper River Delta wetland pond, cycle carbon. Using plots at the Harvard Forest long-term warming … within the eucalypts, a group of fast-growing tree species that are widely grown as feedstocks for …
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