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… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … environments to engineered microbiomes that accelerate biomass processing. This year’s portfolio also includes a … (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. …

… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … and skill development while curating reusable microbiome data. Undergraduate educators are partnering with the JGI … and developmental support from KBase (The Department of Energy Systems Biology Knowledgebase). Myco-Ed is …

… By characterizing the structure and function of a methylthio-alkane … more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in point: for us, the smell of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … of JGI’s breadth of capabilities while also highlighting collaborative research of a scale exceeding a single lab’s … call recommended including plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a …

… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … Please review our FAQ in advance of contacting the PMO office.  …

… Microbial cells infected by viruses undergo metabolic reprogramming. The … from The Ohio State University and the University of Michigan studying how virus infections cause significant … Integrating Collaborations for User Science (FICUS) collaborative science initiative between the  U.S. …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … array of simple and complex components present in plant biomass. This is of interest for bioenergy researchers looking … genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently …

… As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …

… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and …

… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … out in the field, and developing such tools has been a collaborative effort. For example, with support from the  … have evolved to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment …