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Webinar: SIP technologies at EMSL and JGI
… from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more … start with. 2. Q: What would a typical turnaround time be for data once samples are in hand at JGI? A: It takes a few … What instrument / method does the JGI use to pre-screen DNA for enrichment? A:  The JGI uses liquid chromatography–mass …
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … lipid production. These insights into  Y. lipolytica biology and lipid metabolism furthers the U.S. Department of … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how …
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A One-Stop Shop for Analyzing Algal Genomes
… where you can browse the genetic blueprints of these photosynthetic organisms. PhycoCosm is one of the largest data … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence … . The VFP is a summer professional development program for current faculty. Applying faculty members may invite up … Ellen Dow and Elisha Wood-Charlson for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA …
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The Structure of CcmP, a Tandem Bacterial Microcompartment Domain Protein from the β-Carboxysome, Forms a Subcompartment Within a Microcompartment
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at … iron, engineered poplar can be used to develop bioproducts for industrial applications. For example, lignin could be used for building materials … II, a U.S. DOE Office of Science User Facility operated for the DOE Office of Science by Brookhaven National …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper Midwest are often very different than those … team to associate climate adaptations with switchgrass biology, information that could be useful toward the DOE’s …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … thrives in the Arctic, and how different types of microbes form communities. As temperatures fluctuate, salt levels … of the microorganisms that live there.  A  Communications Biology article highlights how one microalga collected from …
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Mining Metagenomes for Cas Proteins
… led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with … side, gene editing is being advanced as a potential therapy for both genetic and complex disease. Finally, gene editing … DNA molecules broadens the range of applications for CRISPR-Cas systems. It also underscores the untapped …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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