The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Dataset of 143 metagenome-assembled genomes from the Arctic and Atlantic Oceans, including 21 for eukaryotic organisms
New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes
IMG ER: a system for microbial genome annotation expert review and curation
HT-SIP: a semi-automated stable isotope probing pipeline identifies cross-kingdom interactions in the hyphosphere of arbuscular mycorrhizal fungi
Pelagic metagenome-assembled genomes from an estuarine salinity gradient in San Francisco Bay.
