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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … forest soils hold keys to tree health and carbon storage — skills that matter increasingly as the climate warms. … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse … experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in …
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Ben Bowen
… developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, … Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: NSF …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … user service and workforce development. As of February 2025, we have already completed 37% of the two-year …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … an artificial environment. It is particularly helpful for studying physiological and biochemical processes driving the …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: … registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful … is through a method called Multiple Displacement Amplification, and most genomes that were acquired through it were … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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Marine Microbe Contains Multitudes
Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … research and innovation program (grant agreement no. 852725; ERC-StG ‘TerreStriAL’). The work was further supported …
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