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Building Wet and Dry Lab Skills
… Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium distachyon plant … worked with Sharon Greenblum from the User Support Analysis team to analyze plant microbiome data via programming … the beginning, like I said before, I was, I felt like I was down here. And now I feel like I'm up here. I can explain …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga … more clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy …
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Boosting Small Molecule Production in Super “Soup”
… components of lysed cells. By separating the production of enzymes (during growth) and the biochemical production … and  biofuels . This first report of their work, supported through the Emerging Technologies Opportunity … The work started with yeast strains engineered by Alper’s team to convert the sugar glucose to the products including …
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Multi-omic Analyses of Extensively Decayed Pinus contorta Reveal Expression of a Diverse Array of Lignocellulose-Degrading Enzymes
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In vitro Characterization of Phenylacetate Decarboxylase, a Novel Enzyme Catalyzing Toluene Biosynthesis in an Anaerobic Microbial Community
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Triphenyltin degradation and proteomic response by an engineered Escherichia coli expressing cytochrome P450 enzyme
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the … company, where he led the Production Informatics team in delivering validated bioinformatics pipelines and a …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… the Danforth Plant Science Center (Danforth Center) drove up and down the highways of the continental United States, … moment when the cluster of seeds at the tip of each branch breaks apart so the seeds can disperse – so that the seeds … the plant to be collected.  Association mapping led the team to identify a gene called Less Shattering 1 (SvLes1); …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna Bennett and mentor Robert Bowers, … and Dr. Frederik Schulz with the New Lineages of Life Group at JGI. And we’ve been working on isolating and … JGI for me has been definitely the people. For example, my team, the GOLD team and my mentors are very helpful and very …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… moved to a lower-salinity environment with how a control group responded when moved to an environment of comparable … assess nutrient concentration and cell death. Immediately upon transfer, the experimental samples exhibited … significant signs of recovery through increased nutrient uptake and decreased cell death.  Scientists then extracted …
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Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails
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Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
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