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Ben Bowen
NIH K25 Mentored Career Development awardee 1998-2003: NSF Graduate research training fellowship in biomolecular … spectrometry imaging. Analytical chemistry, 89(11), 5818–5823. Baran, R., Brodie, E., Mayberry-Lewis, J., Hummel, E., Da … Rubel, O., Prabhat, Mahoney, M., & Bowen, B. (2015). Identifying important ions and positions in mass spectrometry …
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A Community Resource for Secondary Metabolite Researchers
… public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it … is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and archaeal genome … expediting BGC and biosynthesis research.  Summary Over the years several secondary metabolites databases have been made …
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Tracing the Evolution of Shiitake Mushrooms
Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the Americas to trace the evolution … Lentinula genus diverged roughly 28 million years ago, when the largest mammal ever, Paraceratherium, … samples was a global collaboration that brought together 39 researchers from eight different countries. Genome and …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… that adapted to marine environments hundreds of millions of years ago.  The Impact Chloroflexota are bacteria that act … production. … The work (proposal:  https://doi.org/10.46936/10.25585/60000691 , and  https://doi.org/10.46936/10.25585/60007554 ) conducted by the U.S. Department of …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types … peatlands in the face of a warming climate. Identifying these sex chromosomes and their role in sphagnum’s … protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US …
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Making a Lichen Together
… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from … by a DOE-Biological Environmental Research grant No FWP 61327 to FRC and PL (for RNAseq). The work at the Joint Genome …
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An Automated Tool for Assessing Virus Data Quality
… fragments. Additionally, CheckV was able to identify just over 17,000 contiguous sequences (contigs) of … U.S. Department of Energy under contract no. DE-AC02-05CH11231. This work was also supported the grant #2016/23218-0 from São Paulo Research Foundation (FAPESP). A.P.C. …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Baldrian’s team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) … referencing the database, Baldrian’s team was able to identify enzymes in the soil and who made them. Based on data … fungal enzymes actually outnumbered bacterial enzymes 3-to-1. Additionally, the fungal enzymes the team found …
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Daniel Udwary
… … PhD in Chemistry, Johns Hopkins University (2003) MS in Chemistry, Johns Hopkins University (2000) BS in …
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