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Tanja Woyke
… of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist … provides direction, leadership and oversight for all of the JGI user programs, including the Community Science Program … 20: 721 Nayfach et al. 2021. A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … and data  are publicly available through MycoCosm , the JGI’s web portal for fungal genome data.   The Impact This … proteins plus one ribosomal protein gene — were present in every genome examined. But while these core genes were the …
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Tour the IGB
… zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users … amenable to statistical analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me during my … liked the fairly flat organizational structure, and found everyone to be welcoming and helpful. While I am unsure in …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, UC … JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to talking about …
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Building Wet and Dry Lab Skills
… on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running … I'm a summer intern for Sharon and Yi. Tamyra Long : Hello, everyone. My name is Tamyra Long. I'm a senior at Alabama … I'm also an intern at JGI with Yi and Sharon. Yi Zhai : Hi, everyone. My name is Yi Zhai. I'm a project scientist at …
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New Research Sheds Light on Diversity in the Deep Sea
… Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents … those plates separate, seawater seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze … data. (Data from the project are available on the  JGI Genome Portal .) The team has also been able to discover …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By …
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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