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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Annual Meeting 2027
…   Save the Date: March 16–18, 2027 The next JGI Annual Meeting will be held in March 2027 at the Oakland … Stefani Ferreira , JGI Administrative and Logistics Support  …
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CSP Large Scale Call
… that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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Mike Sneddon
… and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( Actinomycetota … type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving over …
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Supporting Global Research into Actinomycetes
… and the focus of a  recent paper published in  Microbial Genomics .   “Studying actinomyces, especially Streptomyces and … other related organisms, requires using more specialized tools, skills and protocols,” explained Hiroshi Otani, an … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, as well as a …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … security. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries … of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science …
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MycoCosm Tutorial
… a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, …
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Extracting the Secrets of Secondary Metabolites
… has historically been limited due to the lack of robust tools available for carrying CRISPR into microorganisms. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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Genome Insider
… Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of …
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