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Tanja Woyke
… Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her … was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont … of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist …
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Prokaryote Program User Advisory Committee
… and scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs' management teams on how to …
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The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape
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Tracing the Evolution of Shiitake Mushrooms
… mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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An Automated Tool for Assessing Virus Data Quality
… and computational approaches, more and more virus sequences are being recovered and identified from … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … Biotechnology , a team from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes … along with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public … go unrecognized. Researchers at the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… and they worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … isolate it. The JGI provided a range of constructs based on sequences for MAR enzymes from different organisms to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat bogs also serve the … by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Trent Northen
… in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic …
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A Community Resource for Secondary Metabolite Researchers
… agriculture. This comprehensive public repository of BGC sequences that come pre-annotated using multiple commonly … specific features or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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