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Duplications and losses in gene families of rust pathogens highlight putative effectors
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Massie S. Ballon
… S. Ballon is the Communications and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, … awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the next generation … collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping …
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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Finding the Fermenters
… and comprehensive database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into … multiple sources, including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Learning to Look
… a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse …
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Fifteen years of microbial genomics: meeting the challenges and fulfilling the dream
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of … can work with you to re-map the data. If your rna-seq data doesn’t necessarily agree, we also have a way to do manual … project? A: Combination of: DOE mission relevance Science User community – trying to produce resources for …
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Next-generation transcriptome assembly
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report the discovery of miniature … suite of tools managed by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … potential for AI-driven studies of energy metabolism. The Science Researchers produced nearly 10,000 new annotations … go unrecognized. Researchers at the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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