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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The … Manager Sarah Sharman recently interviewed study first author Avinash Sreedasyam, a HudsonAlpha senior scientist, …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… produced by living organisms. The collaboration between the JGI and the Foundry on this project highlights an  ongoing partnership that combines the JGI’s genomic capabilities with the Foundry’s nanoscale materials research. As described in the JGI’s latest strategic plan, the Biomolecular Materials …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Honey Bee Gut Microbiota Divvy Up Dinner
… these bacterial groups. But why the strain variability? The authors think the reason may be that … enzymes themselves. One other finding that interested the authors was that an evolutionary analysis of  … often lack the ability to break down hemicellulose. The authors think this might have to do with the differences in …
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Ian Blaby
… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … Editorial Board member of Biology and Synthetic Biology JGI Co-chair, People Stewardship committee (2020-2022) UCLA …
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Leo Baumgart
… binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and … in grass nodal roots." Plant Physiology (2025): kiaf215. Kerstens, Merijn, Yvet Boele, Abraham Morales-Cruz, … et al. "Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)." In 2025 IEEE …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … correlates with population structure. Nat. Comm. 8(1), 2184 doi: 10.1038/s41467-017-02292-8 Genetics and Genomics … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Natural Prodcast Episode 19: Bill Fenical
… things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … So fortunately, the secondary metabolite component of the JGI, people are interested in this area. DAN UDWARY: I know …
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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … assembled the genomes of these five cotton lineages. Senior authors of the  paper published April 20, 2020 in  Nature … cattle feed crop,” noted David Stelly, another study co-author at Texas A&M University. “This report establishes new …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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