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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces they … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
Learn more
Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s … Under Changing Environments) project, assessing how northern peatland ecosystems respond to increases in … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … By comparing genetic information from similar organisms, researchers have gained insights on why the dry rot ( Serpula … – var. lacrymans from Europe and var. shastensis from North America – against a third fungal Serpula species, S. …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their work on communities of … floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from academia, industry, and government …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … soil. These fungi help shape a forest’s ecology. They store carbon and cycle key nutrients like nitrogen and phosphorus.  This way, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
Learn more
JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth … to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a … are open, it’s the same pore in the leaf through which carbon dioxide enters the leaf for photosynthesis.  ALISON:  …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … poplars with optimized lignin, engineering heat-resilient algae for industrial applications, and developing RNA … systems to optimize microbial bioreactors. This genomic research creates new opportunities for biomanufacturing, from …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … organisms carry out important environmental processes like  carbon fixation , nitrogen cycling and methane production. … the roles viruses and their host microbes play in nutrient cycles. …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … in development of new, advanced mass spectrometry research products such as stable isotope probing (SIP) to … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency declared the North Railroad Avenue Plume (NRAP) a Superfund site. The … in New Mexico via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … around this structure to facilitate sharing.  Recently, researchers have been able to study both sides of this …
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