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Fungal Friends or Foes in Plant Roots
… fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The team then compared this dataset against nearly 80 previously published fungal genomes on the JGI data portal …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA … a cysteine protease involved in capsid maturation. Recently reported in  Microbiome , researchers from the US Department …
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Daniel Udwary
Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the JGI, he … "Natural Prodcast" podcast, a "fireside chat"-style podcast about natural products and the science and scientists of …
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A Natural Mechanism Can Turbocharge Viral Evolution
The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using proteins … acknowledge support from the EMERGE Institute (NSF #2022070). Sequencing of the Stordalen Mire samples used …
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Building Sphagnum Genomic Resources
… resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel … decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high … the University of Konstanz and the University of Vienna  reported recovering draft metagenome-assembled genomes for …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced … Alternate Metabolic Pathways And there is something special about these new lineages recently tied to methanogenesis. …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes …
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10 From JGI on the 2019 Highly Cited Researchers List
… includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the Methodology … each of these researchers were involved in that were reported on over the last year: Kerrie Barry and Jeremy … gradient across the United States. Go here to learn more about the project . Igor Grigoriev and Asaf Salamov were …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… in hot springs. Hear how their recent work revealed more about the history of the Chloroflexota phylum and a new way …
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From Textbook to Real World Applications
La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… yield and climate resilience of algae — for potential use as biomass or in biomass conversion to biofuel. Summary … that live there.  A  Communications Biology article highlights how one microalga collected from water on the ice … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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How to Target a Microbial Needle within a Community Haystack
… targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and … traditional shotgun metagenomics approach to learning more about environmental samples starts with researchers first … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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