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Individual genome assembly from complex community short-read metagenomic datasets
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Conversion of Amazon rainforest to agriculture alters community traits of methane‐cycling organisms
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … Comparative genomic analysis of the thermophilic biomass-degrading fungi  Myceliophthora thermophila and  Thielavia … and lignocellulose degradation encoded in the genome sequence of  Schizophyllum commune . Nat Biotech.  2010; 28: …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … metabolites for multiple applications The planet’s microbial diversity is immense, yet much of it remains … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   … the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In …
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Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli
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Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research … et al. 2023. Cohort-based learning for microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach …
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Nikos Kyrpides
Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … Metagenomics of the Human Intestinal Tract ( MetaHIT ); Community Cyber-infrastructure for Advanced Marine Microbial …
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Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production
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Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis.
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Host-specific and tissue-dependent orchestration of microbiome community structure in traditional rice paddy ecosystems
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