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The Case for Conservation
… to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the University of Florida, an answer is in … In a recent Scientific Advances article , a team led by McDaniel and his former graduate student Sarah Carey, now at … of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to N.J.W.; the Emil Aaltonen Foundation and the …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  … understand the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of … Energy Joint Genome Institute (JGI) ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …
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Three Join the JGI User Executive Committee
… and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA … Greenham stepped down at the end of her term. In late 2023, the JGI launched a solicitation for nominations for three … a breadth of institutions, research topics and career stages. The election period concluded on January 8, 2024. …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… view of both plant and fungal activity at different stages of this symbiosis. Within that activity, Serrano, Cole … those working,” Cole said.  Other authors on the paper are Danielle Goudeau, Thai Dao, Ronan O’Malley, Rex Malmstrom, …
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JGI announces 2024 New Investigator portfolio
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Uri Neri
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Expanding Virophage Diversity
… approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … sequences.  Further analysis led to the identification of 328 “high quality” (based on completeness) diverse new … has extended the possible virophage genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, the …
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A Complex Confection Decoded: Sugarcane Reference Genome
Phytozome .   … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and https://doi.org/10.46936/10.25585/60001194) conducted by the USA Department of … Energy (DOE) Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility and the DOE …
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JGI User Executive Committee Expands
Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, … roster. Baxter is a principal investigator at the Donald Danforth Plant Science Center, where his group focuses on …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
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Finding the Fermenters
… researchers recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. … interactive browser – contains the phenotypic records of 8,350 organisms along with 4,355 genomes and 13.6 million … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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Chomping Toward Better Plastic Recycling
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