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Microbial Ecology in a Changing Climate
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Microbial adaptability in changing environments
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in … as an undergraduate intern at the JGI helped his career trajectory and ambitions. He reminisced over the impact of a …
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Dan Rokhsar
… and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team … Publications … Selected Publications …
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Matt Blow
… Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger … et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. … Price et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature 557:503-509. …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  … Biology, Research Institute for Genetics and Selection of Industrial Organisms, Moscow, Russia Postdoctoral …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … the Microscale Applications group to operate a similar single-cell genomics pipeline that provides JGI users access … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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