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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for example, crop and … and breeders aren’t interested in waiting decades to develop new crops. One example is an ongoing … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Hiroshi Otani
… Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. … facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, … in understanding how, when and why microbes decide to produce which metabolites. …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product …
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Benjamin Cole
… interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging single-cell … List of pubs available on NCBI …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université Blaise Pascal, France …
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Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first … bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … amplifying their genetic material, thus bypassing the need to culture these microbes in the lab. After joining the JGI, …
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Crysten Blaby-Haas
… University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with … and Cell Science, University of Florida NIH Postdoctoral Researcher, UCLA …
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Ben Bowen
… spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral alignment, molecular … discoveries, supporting the DOE’s Biological and Environmental Research user community in their bioenergy and …
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Matt Blow
… Genome Assembly, QA/QC, and User Support Analysis teams. Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome … editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and …
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Frederik Schulz
… the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic … Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome structure …
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