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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria
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A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … unparalleled model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … While are still working on finalizing the tree and related publication the tree is still in development and not … Q: Has there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 … of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s … Thomas Kuhn in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied … The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A synthesis of bacterial and archaeal phenotypic trait data
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … Work at Lawrence Livermore National Laboratory was conducted …
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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