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Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … break down the wide array of simple and complex components present in plant biomass. This is of interest for …

Large-scale comparative analysis leads to identification of biosynthetic gene … To acknowledge the efforts of the investigators who had done the sampling, Eloe-Fadrosh reached out to more than 200 …

Uri Neri is a computational biologist who spends his days wrangling viral … genomes and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

… 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources … and molecular characterization capabilities in just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS …

Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … (online) Town Hall on the role of user facilities in accelerating research and tips for submitting successful proposals: … by Harnessing Multiple Scientific User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center …

Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … development. Summary With the aim of producing at least one reference genome for every family of fungi, the 1000 …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also … with: Until they came up with this new method, Session mentioned that the analysis for determining the evolutionary …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … as well as the Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are …

Database provides details on river microbes in 90% of US … watershed scale models to manage river ecosystems. One application for the information is the development of …

… food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers … studying those microbial methane-makers. Eventually, that could help us dial back their emissions, while still …

Data from marine heatwave event may foreshadow climate change … impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … weather events such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean …

… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … genes of interest could be associated with a plant’s sex. One outcome could be superfemale plants that have increased …