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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes …
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Supporting FAIR Scientific Workflows with the JGI Analysis Workflow Service (JAWS)
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user … on JGI policies and practices that affect users and their science including technical capabilities offered, proposal … Provide feedback and make recommendations on how the JGI Science Programs can best support the user community. Advise …
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How to Target a Microbial Needle within a Community Haystack
… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … DNA could be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant … increased nutrient uptake and decreased cell death.  Scientists then extracted RNA to analyze gene expression, to …
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Viruses Reprogram Cells into Different Virocells
… infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Gene Expression: From On-Off Switch to Dial
… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library approach to … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … addition, M.D. acknowledges funding from a National Defense Science and Engineering Graduate Fellowship. The work …
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A pipeline for targeted metagenomics of environmental bacteria
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Coordinating Environmental Genomics and Geochemistry Reveals Metabolic Transitions in a Hot Spring Ecosystem
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Comparison of 26 Sphingomonad Genomes Reveals Diverse Environmental Adaptations and Biodegradative Capabilities
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Seven genome sequences of bacterial, environmental isolates from Pony Lake, Antarctica.
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