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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint … for the accepted proposals, said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize poorly-studied algal and viral …
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JGI Announces 2025 New Investigator Portfolio
Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for … The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, …
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Katherine Louie
… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and Chemical Engineering.  DOI: … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in …
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Microtopography Matters: Belowground CH4 Cycling Regulated by Differing Microbial Processes in Peatland Hummocks and Lawns
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own goals to achieve, they constantly … with each other on new ways of presenting and researching science. …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have …
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Rex Malmstrom
… that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to … But not all scientists have the expertise and resources to do DNA design and synthesis work. This is where … their collaborations. One review article in the collection, Genomics-enabled analysis of specialized metabolism in …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, … genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we will present current and … Program and how you can use the KBase system to accelerate your plant genomics research. …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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