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DAP-seq Drives Robust Mapping of Gene Regulation
… Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … regulatory “switches” in species beyond traditional models. Updates to DAP-seq build upon the previous version in … with smaller genomes, such as bacteria and certain fungi. Scaling the technology’s availability to users is a …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … spans 15 years and involves more than 17 research groups. The team set out to characterize the transcriptome – … updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio …
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Doubling Down on Known Protein Families
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … more than doubled the number of protein families known up until now, and identified many novel structure … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … sure we could even complete a full project. Every other group I contacted was happy to offer advice but declined to … own high school biology teacher, who helped connect me with internships and training at the Clorox Company and Lawrence …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm portal. Dr. Grigoriev …
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Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities
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The Case for Conservation
… to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how … be associated with a plant’s sex. One outcome could be superfemale plants that have increased fruit and seed yield. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Logos and Templates
… The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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A photoactive carotenoid protein acting as light intensity sensor
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
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Leadership
… This group is responsible for institutional strategic planning, … the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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