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Soil virus offers insight into maintaining microorganisms
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The specific protein described in  a recent study in  Nature Communications , a chitosanase, is tied to carbon … using high-brightness X-rays.  This study only begins to unearth the insights to be found within soil viruses and AMGs. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to work on the … publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference sequence of …
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Making a Lichen Together
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available … or minutes — a trait that could help improve crop drought resilience. It’s a superpower even Marvel’s Brock/Venom …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have … outputs, such as data, publications and software. The JGI supports the entire data life cycle, and embeds metadata …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
…   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be converted to … The Impact Despite constituting less than 5% of land on Earth, peatlands store approximately one-third of the …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … for a proposal, we encourage you to contact the relevant JGI  Science Program leads to discuss available options. …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization … and currently leads the Viral Genomics group at the JGI to further explore the ecological and evolutionary …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, … How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal …
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz et al. 2022. Giant virus … . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better understand the nature … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 2021, which aims in part to build off of this work. Former JGI postdoctoral scholar Margot Bezrutczyk collaborated …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… materials essential for national security, supply-chain resilience and diversifying industrial feedstock sources. …
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