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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … — skills that matter increasingly as the climate warms. However, these are complicated interactions to untangle. … of soil RNA — we can access — ‘What are they doing? How do they interact?’” said senior author Francis Martin, a …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. The Science By … , scientists have enhanced our understanding of how early plants transitioned from water to land. Key gene … existed in close algal relatives  to terrestrial plants showcases how early plants built upon an ancient genetic …
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Adopt-A-Genome
… but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available … (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani …
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Accelerating Metagenomics Discoveries with Deep Learning
… from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with … difficult to assemble and interpret. The workshop aimed to showcase how researchers are utilizing deep learning to automatically …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal … host — often, a fellow archaeal microbe. Understanding how these hosts and hitchhikers coexist is key for …
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The Busy World of Deep Sea Eruptions
The ocean depths are vast and dark. But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal vents — … Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in … a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired … the fruiting of soil saprotrophic mushrooms. To date, how the nutritional acquisition of the morel mycelium is …
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Webinar: Introducing the BioSANS capability
The BioSANS instrument is at the Center for Structural Molecular … Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the Biological …
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Supercharging SIP in the Fungal Hyphosphere
… probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully … land plants, which means they offer a lot of insights into how plant materials can be broken down for things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … sequencing. A study  recently published in  Microbiome shows that the way nutrients flow through the ecosystem of …
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Computationally Classifying Fungal Lifestyles
The Science As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative genomes of … of  Dothideomycetes could provide more insights into how these fungi have adapted to stress and host specificity, …
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Training the Next Generation of Talent
… (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the University of … of chemotaxis in the Arabidopsis microbiome, particularly, how bacteria can be driven toward compounds produced by the … the best to use,” he says. “Many academic labs don’t know how to analyze RNA-Seq data very well, sending it out to …
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