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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … with joint appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years … Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Computational Sieves to Filter Sequences There are more microbes on the planet than particles in a handful of dirt, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Extracting the Secrets of Secondary Metabolites
… to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers … target microbes, users of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … the interactions that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI … Capabilities Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of how microbes control useful chemistry in other organisms.  … conditions. Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational … interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and …
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops … flow cytometry protocols for targeted recovery of specific microbes. …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their experiences below. Name: Noelle Anderson Class Year: At the …
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